Mahillon M., Debonneville C., Fontdevila Pareta N., Groux R., Roquis D., Brodard J., Faoro F., Foissac X., Schumpp O., Dittmer J.
Comparative genomics unveils the lifestyle transition of phytopathogenic Arsenophonus strains.
In: IIRB Seminar SBR 2025. 5 June, Göttingen (DE). 2025.
Mahillon M., Debonneville C., Fontdevila Pareta N., Groux R., Roquis D., Brodard J., Faoro F., Foissac X., Schumpp O., Dittmer J.
Comparative genomics unveils the lifestyle transition of phytopathogenic Arsenophonus strains.
In: 18th EAPR Virology Section. 2. June, Nyon - Agroscope Changins. 2025.
Valouzi H., Dizadji A., Golnaraghi A., Salami S.A., Fontdevila Pareta N., Önder S., Massart S.
First detection of saffron dwarf virus, wheat dwarf virus, wheat dwarf virus‐associated alphasatellite and a new putative potyvirus species in saffron in Iran.
New Disease Reports, 51, (1), 2025, Artikel e70022.
Fox A., Botermans M., Ziebell H., Fowkes A.R., Fontdevila Pareta N., Massart S., Rodoni B., Chooi K.M., Kreuze J., Kumar P.L., Cuellar W.J., Carvajal-Yepes M., MacDiarmid R.M.
Implications of high throughput sequencing of plant viruses in biosecurity: A decade of progress?
In: International Advances in Plant Virology 2025 (IAPV25). 8 April, Hrsg. AAB Virology Group, Murcia (ES). 2025.
Mahillon. M., Debonneville C., Groux. R., Roquis. D., Brodard J., Faoro F., Foissac X., Schumpp O., Dittmer J.
From insect endosymbiont to phloem colonizer: Comparative genomics unveils the lifestyle transition of phytopathogenic Arsenophonus strains.
mSystems, 10, (5), 2025, Artikel e01496-24.
Dittmer J., Mahillon M., Debonneville C., Faoro F., Foissac X., Schumpp O., Chouaia B.
The endosymbiont consortia of two Cixiidae planthoppers reveal an ancient symbiosis with 'Candidatus Mirabilia symbiotica'.
Environmental Microbiology Reports, 17, (5), 2025, Artikel e70204.
Fox A., Botermans M., Ziebell H., Fowkes A. R., Fontdevila Pareta N., Massart S., Brendan R., Chooi K.M., Kreuze J., Kumar P. L., Cuellar W. J., Carvajal-Yepes M., MacDiarmid R. M.
Implications of high throughput sequencing of plant viruses in biosecurity: A decade of progress?
Peer Community Journal, 5, 2025, Artikel e71.
Rubino L., Abrahamian P., An W., Aranda M. A., Ascencio-Ibañez J. T., Bejerman N., Blouin A., Candresse T., Canto T., Cao M., Carr J. P., Cho W. Y., Constable F., Dasgupta I., Debat H. und weitere
Summary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses from the Plant Viruses Subcommittee, 2025.
Journal of General Virology, 106, (7), 2025.
Valouzi H., Dizadji A., Golnaraghi A., Alireza Salami S., Fontdevila Pareta N., Önder S., Selmi I., Rollin J., Berhal C., Tamisier L., Maclot F., Wang L., Zhang R., Bahlolzada H., Lefeuvre P. und weitere
A virome scanning of saffron (Crocus sativus L.) at the national scale in Iran using high-throughput sequencing technologies.
Viruses, 17, (8), 2025, Artikel 1079.
Fuchs M., Al Rwahnih M., Blouin A., Burger J., Chooi K. M., Constable F., Ertunc F., Fiore N., Habili N., Hily J.-M., Katis N., Lemaire O., Maliogka V. I., Maree H. J., Minafra A. und weitere
A list of eclectic viruses, virus-like diseases and viroids of grapevines that should not be considered for regulatory oversight: A global plea from virologists.
Journal of Plant Pathology, 107, 2025, 847-858.
Fontdevila Pareta N., Gailly C., Blouin A., Buchmann B., Bünter M., Candresse T., Dubuis N., Kutnjak D., Lateur M., Pecman A., Steyer S., Massart S.
Virome scanning of pear germplasm collections identifies a new Velarivirus and extends the geographical spread of three other pear viruses.
Phytobiomes Journal, 9, (1), 2025, 68-79.
Tzanetakis I. E., Aknadibossian V., Špak J., Constable F., Harper S. J., Hammond J., Candresse T., Folimonova S. Y., Freitas-Astúa J., Fuchs M., Jelkmann W., Maliogka V. I., Marais A., Martin R. R., Mollov D. und weitere
Streamlining global germplasm exchange: Integrating scientific rigor and common sense to exclude phantom agents from regulation.
Plant Disease, 109, (4), 2024, 736-755.
Temple C., Blouin A., Boezen D., Botermans M., Durant L., De Jonghe K., de Koning P., Goedefroit T., Minet L., Steyer S., Verdin E., Zwart M., Massart S.
Biological characterization of physostegia chlorotic mottle virus, an emergent virus infecting vegetables in diversified production systems.
Phytopathology, 114, (7), 2024, 1680-1688.
Mahillon M., Brodard J., Schoen R., Botermans M., Dubuis N., Groux R., Pannel J., Blouin A., Schumpp O.
Revisiting a pollen-transmitted ilarvirus previously associated with angular mosaic of grapevine.
Virus Research, 344, (199362), 2024, 1-10.
Harmsen N., Vesga P., Glauser G., Klötzli F., Heiman C., Altenried A., Vacheron J., Muller D., Moënne-Loccoz Y., Steinger T., Keel C., Garrido-Sanz D.
Natural plant disease suppressiveness in soils extends to insect pest control.
Microbiome, 12, (127), 2024, 1-16.
Romero Lozano I., Hévin S., Kehrli P.
New insights into sour rot: A complex interaction between the microbial community, vinegar flies and weather.
IOBC-WPRS Bulletin, 171, 2024, 67-74.
Moubset O., François S., Maclot F., Palanga E., Julian C., Claude L., Fernandez E., Rott P., Daugrois J-H., Antoine-Lorquin A., Bernardo P., Blouin A., Temple C., Kraberger S., Fontenele R. und weitere
Once upon a time, the VANA story based on the review "virion-associated nucleic acid-based metagenomics: A decade of advances in molecular characterization of plant viruses".
In: 19e Rencontres de virologie végétale (RVV2023). 15 January, Aussois (FR). 2023.
Kuhn J., Abe J., Adkins S., Alkhovsky S., Avšič-Županc T., Ayllón MA., Bahl J., Balkema B. A., Ballinger M., Baranwal V., Beer M., Bejerman N., Bergeron E., Biedenkopf N., Blair C. und weitere
Annual (2023) taxonomic update of RNA-directed RNA polymerase-encoding negative-sense RNA viruses (realm Riboviria: kingdom Orthornavirae: phylum Negarnaviricota).
Journal of General Virology, 104, (8), 2023, 1-55.
Rivarez M. P. S., Faure C., Svanella-Dumas L., Pecman A., Žnidaric M. T., Schönegger D., De Jonghe K., Blouin A., Rasmussen D., Massart S., Ravnikar M., Kutnjak D., Marais A., Candresse T.
Diversity and pathobiology of anilarvirus unexpectedly detected in diverse plants and global sequencing data.
Phytopathology, 113, (9), 2023, 1729-1744.
Blouin A., Dubuis N., Brodard J., Apothéloz L., Altenbach D., Schumpp O.
Symptomatic, widespread, and inconspicuous: new detection of tomato fruit blotch virus.
Phytopathologia Mediterranea, 62, (3), 2023, 349-354.
Jaccard A., Dubuis N., Kellenberger I., Brodard J., Schnée S., Gindro K., Schumpp O.
New viruses of Cladosporium sp. expand considerably the taxonomic structure of Gammapartitivirus genus.
Journal of General Virology, 104, (8), 2023, 1-12.
Rollin J., Bester R., Brostaux Y., Caglayan K., De Jonghe K., Eichmeier A., Foucart Y., Haegeman A., Koloniuk I., Kominek P., Maree H., Onder S., Posada Céspedes S., Roumi V., Šafářová D. und weitere
Detection of single nucleotide polymorphisms in virus genomes assembled from high-throughput sequencing data: Large-scale performance testing of sequence analysis strategies.
PeerJ, 11, 2023, 1-25.
Moubset O., François S., Maclot F., Palanga E., Julian C., Claude L., Fernandez E., Rott P., Daugrois J.-H., Antoine-Lorquin E., Bernardo P., Blouin A., Roumagnac P.
Once upon a time, the VANA story based on the review « virion-associated nucleic acid-based metagenomics: a decade of advances in molecular characterization of plant viruses ».
In: 19es Rencontres de Virologie Végétale. 15 January, Aussois. 2023, 1.
Schumpp O.
Tomato brown rugose fruit virus : Biologie, diagnostic et perspectives pour les producteurs.
In: Journée d’information Cultures maraîchères sous Serre. 29 juin, Hrsg. Agroscope, Conthey. 2023, 1-15.
Haegeman A., Foucart Y., De Jonghe K., Goedefroit T., Al Rwahnih M., Boonham N., Candresse T., Gaafar Y. Z. A., Hurtado-Gonzales O. P., Zwitter Z. K., Kutnjak D., Lamovšek J., Lefebvre M., Malapi M., Mavrič Pleško I. und weitere
Looking beyond virus detection in RNA sequencing data: Lessons learned from a community-based effort to detect cellular plant pathogens and pests.
Plants, 12, (11), 2023, 1-20.
Schoen R., Koning P. P. M., de Krom C., Oplaat C., Westenberg M., Massart S., Temple C., De Jonghe K., Blouin A., Botermans M.
First report of lettuce ring necrosis virus in chili pepper and tomato in Belgium and the Netherlands.
Plant Disease, 107, (8), 2023, 2560.
Silva J. M. S., Melo F. L., Elena S. F., Candresse T., Sabanadzovic S., Tzanetakis I. E., Blouin A., Villamor D. E. V., Mollov D., Constable F., Cao M., Saldarelli P., Cho W. K., Nagata T.
Virus classification based on in-depth sequence analyses and development of demarcation criteria using the Betaflexiviridae as a case study.
Journal of General Virology, 103, (11), 2023, 1-16.
Maclot F., Debue V., Malmstrom C. M., Filloux D., Roumagnac P., Eck M., Tamisier L., Blouin A., Candresse T., Massart S.
Long-Term Anthropogenic Management and Associated Loss of Plant Diversity Deeply Impact Virome Richness and Composition of Poaceae Communities.
Microbiology Spectrum, 11, (2), 2023, 1-17.
Magoye E., Nägeli L., Bühlmann A., Hilber M., Keller P., Mühlethaler K., Riat A., Schrenzel J., Freimoser F.
Clinical Aureobasidium isolates are more fungicide sensitive than many agricultural isolates.
Microbiology Spectrum, 11, (2), 2023, 1-5.
Trontin C., Agstner B., Altenbach D., Geraldine A., Baginska H., Brittain I., Chabirand A., Chappé A-M., Dahlin P., Dreo T., Freye C., Gianinazzi C., Harrison C., Jones G., Kaiser M. S. und weitere
What did we achieve with VALITEST an EU project on validation in plant pest diagnostics?
PhytoFrontiers, 3, (1), 2023, 75-81.
Massart S., Adams I., Al Rwahnih M., Baeyen S., Bilodeau G. J., Blouin A., Boonham N., Candresse T., Chandellier A., De Jonghe K., Fox A., Gaafar Y. Z. A., Gentit P., Haegeman A., Ho W. und weitere
Guidelines for the reliable use of high throughput sequencing technologies to detect plant pathogens and pests.
Peer Community Journal, 2, 2022, 1-35.
Mahillon M., Kellenberger I., Dubuis N., Brodard J., Bünter M., Weibel J., Sandrini F., Schumpp O.
First report of Tomato brown rugose fruit virus in tomato in Switzerland.
New Disease Reports, 45, (1), 2022, 1-2.
Mahillon M., Groux R., Bussereau F., Brodard J., Debonneville C., Demal S., Kellenberger I., Peter M., Steinger T., Schumpp O.
Virus yellows and syndrome ”Basses Richesses” in western Switzerland:: A dramatic 2020 season calls for urgent control measures.
Pathogens, 11, (8), 2022, 1-18.
Lebas B., Adams I., Al Rwahnih M., Baeyen S., Bilodeau G.J., Blouin A., Boonham N., Candresse T., ..., Massart S.
Facilitating the adoption of high-throughput sequencing technologies as a plant pest diagnostic test in laboratories: A step-by-step description.
EPPO / OEPP Bulletin, 52, (2), 2022, 394-418.
Moubset O., François S., Maclot F., Palanga E., Julian C., Claude L., Fernandez E., Rott P.C.E., Daugrois J. H., Lorquin A. A., Bernardo P., Blouin A., Temple C., Kraberger S., Fontenele R. S. und weitere
Virion-associated nucleic acid-based metagenomics: A decade of advances in molecular characterization of plant viruses.
Phytopathology, 112, (11), 2022, 2253-2272.
Chooi K.M., Bell V.A., Blouin A., Cohen D., Mundy D., Henshall W., MacDiarmid R.M.
Grapevine leafroll-associated virus 3 genotype influences foliar symptom development in New Zealand vineyards.
Viruses, 14, (7), 2022, 1-19.
Temple C., Blouin A., De Jongh K., Foucart Y., Botermans M., Westenberg M., Schoen R., Gentit P., Visage M., Verdin E., Wipf-Scheibel C., Ziebell H., Gaafar Y. Z. A., Zia A., Yan X. H. und weitere
Biological and genetic characterization of Physostegia chlorotic mottle virus in Europe based on host range, location, and time.
Plant Disease, online, (8 April), 2022, 1-56.
Reynard J.-S., Brodard J., Zufferey V., Rienth M., Gugerli P., Schumpp O., Blouin A.
Nuances of responses to two sources of grapevine leafroll disease on pinot noir grown in the field for 17 years.
Viruses, 14, (6), 2022, 1-17.
Fontdevila Pareta N., Lateur M., Steyer S., Blouin A., Massart S.
First report of apple rubodvirus 1, apple luteovirus 1, and apple hammerhead viroid infection of apples in Belgium.
New Disease Reports, 45, (2), 2022, 1-2.
