Publikationen

Blouin A.
Viroses de la vigne en Suisse.
In: innovino. 12 février, Savigny (CH). 2025.

Fuchs M., Al Rwahnih M., Blouin A., Burger J., Chooi K. M., Constable F., Ertunc F., Fiore N., Habili N., Hily J.-M., Katis N., Lemaire O., Maliogka V. I., Maree H. J., Minafra A. und weitere
A list of eclectic viruses, virus-like diseases and viroids of grapevines that should not be considered for regulatory oversight: A global plea from virologists.
Journal of Plant Pathology, 107, 2025, 847-858.

Fontdevila Pareta N., Messaadi M., Lecoultre N., Gindro K., Schumpp O.
Exploring the diversity of mycoviruses in grapevine associated fungi.
In: 20è Rencontres de Virologie Végétale. 19 January, Aussois (FR). 2025.

Brodard J., Buchmann B., Bünter M., Dubuis N., Passerat M., Schumpp O., Blouin A.
Chasing phantoms.
In: Rencontres de Virologie Végétale. 19 January, Aussois (FR). 2025.

Monod V., Zufferey V., Wilhelm M., Viret O., Gindro K., Croll D., Hofstetter V.
Identifying the pedoclimatic conditions most critical in the susceptibility of a grapevine cultivar to esca disease.
OENO One, 59, (1), 2025.

Schumpp O., Debonneville C.
Bien identifier les micro-organismes responsables des maladies des plantes.
Journal Agri, 24 janvier, 2025, 17.

Frei G., Ferrante A., Butera L., Poretti M., Bassi M., Mazzi D.
SmartTrap: un progetto per un migliore monitoraggio degli insetti nocivi.
Agricoltore Ticinese, 157, (4), 2025, 14-15.

Fontdevila Pareta N., Gailly C., Blouin A., Buchmann B., Bünter M., Candresse T., Dubuis N., Kutnjak D., Lateur M., Pecman A., Steyer S., Massart S.
Virome scanning of pear germplasm collections identifies a new Velarivirus and extends the geographical spread of three other pear viruses.
Phytobiomes Journal, 9, (1), 2025, 68-79.

Tzanetakis I. E., Aknadibossian V., Špak J., Constable F., Harper S. J., Hammond J., Candresse T., Folimonova S. Y., Freitas-Astúa J., Fuchs M., Jelkmann W., Maliogka V. I., Marais A., Martin R. R., Mollov D. und weitere
Streamlining global germplasm exchange: Integrating scientific rigor and common sense to exclude phantom agents from regulation.
Plant Disease, In Press, 2024.

Cadena Canals J., Debonneville C., Dubuis N., Jeanrenaud M., Viret O., Schumpp O.
Épidémiologie de la flavescence dorée dans les vignes suisses du nord des Alpes.
In: 1ère Journée Vitivinicole Nationale – 1. Nationale Weinbautagung. 3 décembre, Hrsg. Agroscope, Berne (CH). 2024.

Debonneville C., Cadena Canals J.
La flavescence dorée et son vecteur principal, Scaphoideus titanus.
In: 1ère Journée Vitivinicole Nationale – 1. Nationale Weinbautagung. 3 décembre, Hrsg. Agroscope, Berne (CH). 2024.

Blouin A.
Très présents mais peu connus, les virus de la vigne avancent masqués.
Journal Agri, 19 janvier, 2024, 23.

Dahlin P., Ruthes A. C.
Loss of sterol biosynthesis in economically important plant pests and pathogens: A review of a potential target for pest control.
Biomolecules, 14, (11), 2024, Artikel 1435.

Temple C., Blouin A., Boezen D., Botermans M., Durant L., De Jonghe K., de Koning P., Goedefroit T., Minet L., Steyer S., Verdin E., Zwart M., Massart S.
Biological characterization of physostegia chlorotic mottle virus, an emergent virus infecting vegetables in diversified production systems.
Phytopathology, 114, (7), 2024, 1680-1688.

Mahillon M., Brodard J., Schoen R., Botermans M., Dubuis N., Groux R., Pannel J., Blouin A., Schumpp O.
Revisiting a pollen-transmitted ilarvirus previously associated with angular mosaic of grapevine.
Virus Research, 344, (199362), 2024, 1-10.

Temple C., Blouin A., Fontdevila Pareta N., Steyer S., Massart S.
First report of melon chlorotic spot virus in cultivated sorrel (Rumex acetosa) in Belgium.
Plant Disease, 108, (3), 2024, 824.

Mahillon M., Brodard J., Dubuis N., Gugerli P., Blouin A., Schumpp O.
Mixed infection of ITPase-encoding potyvirid and secovirid in Mercurialis perennis: evidences for a convergent euphorbia-specific viral counterstrike.
Virology Journal, 21, (6), 2024, 1-13.

Chooi K. M., Bell V. A., Blouin A., Sandanayaka M., Gough R., Chhagan A., MacDiarmid R. M.
The New Zealand perspective of an ecosystem biology response to grapevine leafroll disease.
Advances in Virus Research, 118, 2024, 213-272.

Ruthes A. C., Dahlin P.
Wild strawberry Fragaria vesca as potential source for phytonematode resistance.
European Journal of Plant Pathology, 168, 2024, 757-762.

Gindro K.
Fondation Lotte et Willi Günthart-Maag.
Fondation Lotte et Willi Günthart Maag, Regensberg. 2024, 33 S.

Gindro K.
Champignons, un monde sans fin.
In: Conférences Scientifiques du Centre culturel du Manoir, Cologny (GE). 11 juillet, Cologny. 2024.

Gindro K.
Remise du Prix Rudolf Maag 2024 à Katia Gindro.
In: Remise des Prix de la Fondation Lotte et Willi Günthart-Maag. 5 juin, Hrsg. Fondation Lotte et Willi Günthart Maag, Regensberg. 2024.

Harmsen N., Vesga P., Glauser G., Klötzli F., Heiman C., Altenried A., Vacheron J., Muller D., Moënne-Loccoz Y., Steinger T., Keel C., Garrido-Sanz D.
Natural plant disease suppressiveness in soils extends to insect pest control.
Microbiome, 12, (127), 2024, 1-16.

Debonneville C., Schumpp O.
La génomique est le nouveau fer de lance de la protection des plantes.
Journal Agri, 31 mai, 2024, 21.

Romero Lozano I., Hévin S., Kehrli P.
New insights into sour rot: A complex interaction between the microbial community, vinegar flies and weather.
IOBC-WPRS Bulletin, 171, 2024, 67-74.

Frick C., Kellerhals M., Cia S., Debonneville C., Passerat M.
Erste Erfahrungen mit robusten Unterlagen gegen Birnenverfall und Apfeltriebsucht.
Obst+Wein, 160, (2), 2024, 15-17.
weitere Sprachen: französisch

Fragnière A.-L., Bacher S., Kehrli P.
Identifying candidate host plants for trap cropping against Drosophila suzukii in vineyards.
Journal of Pest Science, 97, 2024, 1975-1991.

Moubset O., François S., Maclot F., Palanga E., Julian C., Claude L., Fernandez E., Rott P., Daugrois J-H., Antoine-Lorquin A., Bernardo P., Blouin A., Temple C., Kraberger S., Fontenele R. und weitere
Once upon a time, the VANA story based on the review "virion-associated nucleic acid-based metagenomics: A decade of advances in molecular characterization of plant viruses".
In: 19e Rencontres de virologie végétale (RVV2023). 15 January, Aussois (FR). 2023.

Cadena Canals J., Debonneville C., Jeanrenaud M., Viret O., Schumpp O.
Flavescence dorée phytoplasma in northern Swiss vineyards is anthropogenic.
In: Proceedings of the 20th congress of the International Council for the Study of Virus and Virus-Like Diseases of the Grapevine (ICVG). 25-29 September, Hrsg. ICVG, Thessaloniki. 2023, 96-97.

Debonneville C., Cadena Canals J., Linder C., Schumpp O.
Das Auftreten von Flavescence dorée Phytoplasmen in den Schweizer Rebbergen nördlich der Alpen ist anthropogen bedingt.
In: Regionale Rebbautagung. 8. Dezember, Hrsg. Agroscope, Wädenswil. 2023.

Kuhn J., Abe J., Adkins S., Alkhovsky S., Avšič-Županc T., Ayllón MA., Bahl J., Balkema B. A., Ballinger M., Baranwal V., Beer M., Bejerman N., Bergeron E., Biedenkopf N., Blair C. und weitere
Annual (2023) taxonomic update of RNA-directed RNA polymerase-encoding negative-sense RNA viruses (realm Riboviria: kingdom Orthornavirae: phylum Negarnaviricota).
Journal of General Virology, 104, (8), 2023, 1-55.

Rivarez M. P. S., Faure C., Svanella-Dumas L., Pecman A., Žnidaric M. T., Schönegger D., De Jonghe K., Blouin A., Rasmussen D., Massart S., Ravnikar M., Kutnjak D., Marais A., Candresse T.
Diversity and pathobiology of anilarvirus unexpectedly detected in diverse plants and global sequencing data.
Phytopathology, 113, (9), 2023, 1729-1744.

Blouin A., Dubuis N., Brodard J., Apothéloz L., Altenbach D., Schumpp O.
Symptomatic, widespread, and inconspicuous: new detection of tomato fruit blotch virus.
Phytopathologia Mediterranea, 62, (3), 2023, 349-354.

Jaccard A., Dubuis N., Kellenberger I., Brodard J., Schnée S., Gindro K., Schumpp O.
New viruses of Cladosporium sp. expand considerably the taxonomic structure of Gammapartitivirus genus.
Journal of General Virology, 104, (8), 2023, 1-12.

Rollin J., Bester R., Brostaux Y., Caglayan K., De Jonghe K., Eichmeier A., Foucart Y., Haegeman A., Koloniuk I., Kominek P., Maree H., Onder S., Posada Céspedes S., Roumi V., Šafářová D. und weitere
Detection of single nucleotide polymorphisms in virus genomes assembled from high-throughput sequencing data: Large-scale performance testing of sequence analysis strategies.
PeerJ, 11, 2023, 1-25.

Moubset O., François S., Maclot F., Palanga E., Julian C., Claude L., Fernandez E., Rott P., Daugrois J.-H., Antoine-Lorquin E., Bernardo P., Blouin A., Roumagnac P.
Once upon a time, the VANA story based on the review « virion-associated nucleic acid-based metagenomics: a decade of advances in molecular characterization of plant viruses ».
In: 19es Rencontres de Virologie Végétale. 15 January, Aussois. 2023, 1.

Schumpp O.
Tomato brown rugose fruit virus : Biologie, diagnostic et perspectives pour les producteurs.
In: Journée d’information Cultures maraîchères sous Serre. 29 juin, Hrsg. Agroscope, Conthey. 2023, 1-15.

Haegeman A., Foucart Y., De Jonghe K., Goedefroit T., Al Rwahnih M., Boonham N., Candresse T., Gaafar Y. Z. A., Hurtado-Gonzales O. P., Zwitter Z. K., Kutnjak D., Lamovšek J., Lefebvre M., Malapi M., Mavrič Pleško I. und weitere
Looking beyond virus detection in RNA sequencing data: Lessons learned from a community-based effort to detect cellular plant pathogens and pests.
Plants, 12, (11), 2023, 1-20.

Schoen R., Koning P. P. M., de Krom C., Oplaat C., Westenberg M., Massart S., Temple C., De Jonghe K., Blouin A., Botermans M.
First report of lettuce ring necrosis virus in chili pepper and tomato in Belgium and the Netherlands.
Plant Disease, 107, (8), 2023, 2560.

Silva J. M. S., Melo F. L., Elena S. F., Candresse T., Sabanadzovic S., Tzanetakis I. E., Blouin A., Villamor D. E. V., Mollov D., Constable F., Cao M., Saldarelli P., Cho W. K., Nagata T.
Virus classification based on in-depth sequence analyses and development of demarcation criteria using the Betaflexiviridae as a case study.
Journal of General Virology, 103, (11), 2023, 1-16.

Maclot F., Debue V., Malmstrom C. M., Filloux D., Roumagnac P., Eck M., Tamisier L., Blouin A., Candresse T., Massart S.
Long-Term Anthropogenic Management and Associated Loss of Plant Diversity Deeply Impact Virome Richness and Composition of Poaceae Communities.
Microbiology Spectrum, 11, (2), 2023, 1-17.

Temple C., Blouin A., Tindale S., Steyer S., Marechal K., Massart S.
High throughput sequencing technologies complemented by growers’ perceptions highlight the impact of tomato virome in diversified vegetable farms and a lack of awareness of emerging virus threats.
Frontiers in Sustainable Food Systems, 7, 2023, 1-16.

Magoye E., Nägeli L., Bühlmann A., Hilber M., Keller P., Mühlethaler K., Riat A., Schrenzel J., Freimoser F.
Clinical Aureobasidium isolates are more fungicide sensitive than many agricultural isolates.
Microbiology Spectrum, 11, (2), 2023, 1-5.

Mahillon M., Schumpp O.
Jaunisses virales et syndrome des basses richesses en Suisse.
In: Journée phytosanitaire Grandes Cultures. 13 janvier, Bienne. 2023.

Mahillon M., Brodard J., Kellenberger I., Blouin A., Schumpp O.
A novel weevil-transmitted tymovirus found in mixed infection on hollyhock.
Virology Journal, 20, 2023, 1-10.

Trontin C., Agstner B., Altenbach D., Geraldine A., Baginska H., Brittain I., Chabirand A., Chappé A-M., Dahlin P., Dreo T., Freye C., Gianinazzi C., Harrison C., Jones G., Kaiser M. S. und weitere
What did we achieve with VALITEST an EU project on validation in plant pest diagnostics?
PhytoFrontiers, 3, (1), 2023, 75-81.

Robson M., Chooi K. M., Blouin A., Knight S., MacDiarmid R. M.
A National Catalogue of Viruses Associated with Indigenous Species Reveals High-Throughput Sequencing as a Driver of Indigenous Virus Discovery.
Viruses, 14, (11), 2022, 1-18.

Cabianca A., Ruthes A. C., Pawlowski K., Dahlin P.
Tomato Sterol 22-desaturase Gene CYP710A11: Its Roles in Meloidogyne incognita Infection and Plant Stigmasterol Alteration.
International Journal of Molecular Sciences, 23, (23), 2022, 1-14.

Massart S., Adams I., Al Rwahnih M., Baeyen S., Bilodeau G. J., Blouin A., Boonham N., Candresse T., Chandellier A., De Jonghe K., Fox A., Gaafar Y. Z. A., Gentit P., Haegeman A., Ho W. und weitere
Guidelines for the reliable use of high throughput sequencing technologies to detect plant pathogens and pests.
Peer Community Journal, 2, 2022, 1-35.

Hofstetter V., Gindro K.
Esca disease: what we know and new research perspectives.
In: 49th Congress of the Wine Growers M.I.V.A. 14 October, Hrsg. Wine growers M.I.V.A Italia, Udine. 2022, 1-19.

Stucky T., Dahlin P.
Fluopyram: optimal application time point and planting hole treatment to control Meloidogyne incognita.
Agronomy, 12, (7), 2022, 1-11.

Mahillon M., Kellenberger I., Dubuis N., Brodard J., Bünter M., Weibel J., Sandrini F., Schumpp O.
First report of Tomato brown rugose fruit virus in tomato in Switzerland.
New Disease Reports, 45, (1), 2022, 1-2.

Mahillon M., Groux R., Bussereau F., Brodard J., Debonneville C., Demal S., Kellenberger I., Peter M., Steinger T., Schumpp O.
Virus yellows and syndrome ”Basses Richesses” in western Switzerland:: A dramatic 2020 season calls for urgent control measures.
Pathogens, 11, (8), 2022, 1-18.

Lebas B., Adams I., Al Rwahnih M., Baeyen S., Bilodeau G.J., Blouin A., Boonham N., Candresse T., ..., Massart S.
Facilitating the adoption of high-throughput sequencing technologies as a plant pest diagnostic test in laboratories: A step-by-step description.
EPPO / OEPP Bulletin, 52, (2), 2022, 394-418.

Moubset O., François S., Maclot F., Palanga E., Julian C., Claude L., Fernandez E., Rott P.C.E., Daugrois J. H., Lorquin A. A., Bernardo P., Blouin A., Temple C., Kraberger S., Fontenele R. S. und weitere
Virion-associated nucleic acid-based metagenomics: A decade of advances in molecular characterization of plant viruses.
Phytopathology, 112, (11), 2022, 2253-2272.

Chooi K.M., Bell V.A., Blouin A., Cohen D., Mundy D., Henshall W., MacDiarmid R.M.
Grapevine leafroll-associated virus 3 genotype influences foliar symptom development in New Zealand vineyards.
Viruses, 14, (7), 2022, 1-19.

Temple C., Blouin A., De Jongh K., Foucart Y., Botermans M., Westenberg M., Schoen R., Gentit P., Visage M., Verdin E., Wipf-Scheibel C., Ziebell H., Gaafar Y. Z. A., Zia A., Yan X. H. und weitere
Biological and genetic characterization of Physostegia chlorotic mottle virus in Europe based on host range, location, and time.
Plant Disease, online, (8 April), 2022, 1-56.

Reynard J.-S., Brodard J., Zufferey V., Rienth M., Gugerli P., Schumpp O., Blouin A.
Nuances of responses to two sources of grapevine leafroll disease on pinot noir grown in the field for 17 years.
Viruses, 14, (6), 2022, 1-17.

Fontdevila Pareta N., Lateur M., Steyer S., Blouin A., Massart S.
First report of apple rubodvirus 1, apple luteovirus 1, and apple hammerhead viroid infection of apples in Belgium.
New Disease Reports, 45, (2), 2022, 1-2.

Debonneville C., Mandelli L., Brodard J., Groux R., Roquis D., Schumpp O.
The complete genome of the “Flavescence Dorée” phytoplasma reveals characteristics of low genome plasticity.
Biology, 11, (7), 2022, 1-17.

Ruthes A. C., Dahlin P.
The impact of management strategies on the development and status of potato cyst nematode populations in Switzerland: an overview from 1958 to present.
Plant Disease, 106, 2022, 1096-1104.